IL_23WI_167
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_167 not in the Motif Atlas
- Geometric match to IL_8B0X_052
- Geometric discrepancy: 0.1581
- The information below is about IL_8B0X_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32376.2
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
23WI|1|a|C|1158
23WI|1|a|U|1159
23WI|1|a|G|1160
23WI|1|a|C|1161
*
23WI|1|a|G|1175
23WI|1|a|A|1176
23WI|1|a|G|1177
23WI|1|a|G|1178
23WI|1|a|A|1179
23WI|1|a|A|1180
23WI|1|a|G|1181
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain b
- Small ribosomal subunit protein uS2
- Chain i
- Small ribosomal subunit protein uS9
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