IL_28LN_009

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

(OMU)CC(PSU)U(OMU)*AUUCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|OMU|116
28LN|1|A2|C|117
28LN|1|A2|C|118
28LN|1|A2|PSU|119
28LN|1|A2|U|120
28LN|1|A2|OMU|121
*
28LN|1|A2|A|343
28LN|1|A2|U|344
28LN|1|A2|U|345
28LN|1|A2|C|346
28LN|1|A2|G|347

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AE

Small ribosomal subunit protein eS4, X isoform

Chain AI

40S ribosomal protein S8