IL_28LN_010

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAUAAC*GCUAA(OMU)A(OMC)

Length

15 nucleotides

Bulged bases

28LN|1|A2|OMU|172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|G|145
28LN|1|A2|G|146
28LN|1|A2|A|147
28LN|1|A2|U|148
28LN|1|A2|A|149
28LN|1|A2|A|150
28LN|1|A2|C|151
*
28LN|1|A2|G|167
28LN|1|A2|C|168
28LN|1|A2|U|169
28LN|1|A2|A|170
28LN|1|A2|A|171
28LN|1|A2|OMU|172
28LN|1|A2|A|173
28LN|1|A2|OMC|174

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AG

40S ribosomal protein S6

Chain AY

40S ribosomal protein S24

Chain BW

60S ribosomal protein L24