IL_28LN_029

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUGCCAG*CGG(OMU)AAUUC

Length

16 nucleotides

Bulged bases

28LN|1|A2|A|628, 28LN|1|A2|U|630, 28LN|1|A2|U|631

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|G|611
28LN|1|A2|U|612
28LN|1|A2|G|613
28LN|1|A2|C|614
28LN|1|A2|C|615
28LN|1|A2|A|616
28LN|1|A2|G|617
*
28LN|1|A2|C|624
28LN|1|A2|G|625
28LN|1|A2|G|626
28LN|1|A2|OMU|627
28LN|1|A2|A|628
28LN|1|A2|A|629
28LN|1|A2|U|630
28LN|1|A2|U|631
28LN|1|A2|C|632

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AD

40S ribosomal protein S3

Chain AX

Small ribosomal subunit protein uS12

Chain Ae

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein