IL_28LN_041

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAAAAAA(PSU)(PSU)*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|G|807
28LN|1|A2|A|808
28LN|1|A2|A|809
28LN|1|A2|A|810
28LN|1|A2|A|811
28LN|1|A2|A|812
28LN|1|A2|A|813
28LN|1|A2|PSU|814
28LN|1|A2|PSU|815
*
28LN|1|A2|A|849
28LN|1|A2|C|850
28LN|1|A2|C|851
28LN|1|A2|G|852
28LN|1|A2|C|853
28LN|1|A2|A|854
28LN|1|A2|G|855
28LN|1|A2|C|856

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AE

Small ribosomal subunit protein eS4, X isoform

Chain AJ

40S ribosomal protein S9

Chain AL

Small ribosomal subunit protein uS17

Chain AW

40S ribosomal protein S15a