IL_28LN_049
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUAU*AGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28LN_049 not in the Motif Atlas
- Homologous match to IL_9PN5_186
- Geometric discrepancy: 0.0965
- The information below is about IL_9PN5_186
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 42
Unit IDs
28LN|1|A2|G|942
28LN|1|A2|U|943
28LN|1|A2|A|944
28LN|1|A2|U|945
*
28LN|1|A2|A|981
28LN|1|A2|G|982
28LN|1|A2|A|983
28LN|1|A2|C|984
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AB
- 40S ribosomal protein S3a
- Chain AO
- 40S ribosomal protein S14
- Chain BA
- Large ribosomal subunit protein uL2
Coloring options: