IL_28LN_050

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GCUAG*CUUGGACC

Length

13 nucleotides

Bulged bases

28LN|1|A2|G|970

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|G|952
28LN|1|A2|C|953
28LN|1|A2|U|954
28LN|1|A2|A|955
28LN|1|A2|G|956
*
28LN|1|A2|C|967
28LN|1|A2|U|968
28LN|1|A2|U|969
28LN|1|A2|G|970
28LN|1|A2|G|971
28LN|1|A2|A|972
28LN|1|A2|C|973
28LN|1|A2|C|974

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AB

40S ribosomal protein S3a

Chain AO

40S ribosomal protein S14

Chain B5

Large subunit ribosomal RNA; LSU rRNA