IL_28LN_051

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGG(PSU)(PSU)C*GUU

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|A|1042
28LN|1|A2|G|1043
28LN|1|A2|G|1044
28LN|1|A2|PSU|1045
28LN|1|A2|PSU|1046
28LN|1|A2|C|1047
*
28LN|1|A2|G|1071
28LN|1|A2|U|1072
28LN|1|A2|U|1073

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AO

40S ribosomal protein S14

Chain Aa

40S ribosomal protein S26

Chain B5

Large subunit ribosomal RNA; LSU rRNA

Chain BA

Large ribosomal subunit protein uL2