IL_28LN_056

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAGUA(PSU)G*UGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|G|1168
28LN|1|A2|G|1169
28LN|1|A2|A|1170
28LN|1|A2|G|1171
28LN|1|A2|U|1172
28LN|1|A2|A|1173
28LN|1|A2|PSU|1174
28LN|1|A2|G|1175
*
28LN|1|A2|U|1186
28LN|1|A2|G|1187
28LN|1|A2|A|1188
28LN|1|A2|A|1189
28LN|1|A2|A|1190
28LN|1|A2|C|1191

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AX

Small ribosomal subunit protein uS12

Chain Ah

60S ribosomal protein L41