IL_28LN_096
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CCG*UGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28LN_096 not in the Motif Atlas
- Geometric match to IL_8GLP_225
- Geometric discrepancy: 0.2718
- The information below is about IL_8GLP_225
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_19025.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
28LN|1|A2|C|1755
28LN|1|A2|C|1756
28LN|1|A2|G|1757
*
28LN|1|A2|U|1775
28LN|1|A2|G|1776
28LN|1|A2|G|1777
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AG
- 40S ribosomal protein S6
- Chain BW
- 60S ribosomal protein L24
Coloring options: