IL_28LN_118

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

28LN|1|B5|U|467, 28LN|1|B5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|A|466
28LN|1|B5|U|467
28LN|1|B5|U|468
28LN|1|B5|C|469
28LN|1|B5|A|470
28LN|1|B5|A|471
28LN|1|B5|C|472
*
28LN|1|B5|G|682
28LN|1|B5|C|683
28LN|1|B5|G|684
28LN|1|B5|C|685
28LN|1|B5|A|686
28LN|1|B5|U|687
28LN|1|B5|U|688
28LN|1|B5|U|689

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BE

Large ribosomal subunit protein eL6

Chain Br

Large ribosomal subunit protein eL28