IL_28LN_170
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUCAUCAG*CUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 28LN|1|B5|U|1929, 28LN|1|B5|C|1930, 28LN|1|B5|G|2054, 28LN|1|B5|A|2056
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28LN|1|B5|C|1925
28LN|1|B5|U|1926
28LN|1|B5|C|1927
28LN|1|B5|A|1928
28LN|1|B5|U|1929
28LN|1|B5|C|1930
28LN|1|B5|A|1931
28LN|1|B5|G|1932
*
28LN|1|B5|C|2052
28LN|1|B5|U|2053
28LN|1|B5|G|2054
28LN|1|B5|G|2055
28LN|1|B5|A|2056
28LN|1|B5|G|2057
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BH
- 60S ribosomal protein L9
- Chain BM
- 60S ribosomal protein L14
- Chain BO
- 60S ribosomal protein L13a
- Chain BS
- 60S ribosomal protein L18a
- Chain Bm
- Ubiquitin-60S ribosomal protein L40
Coloring options: