IL_28LN_174

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UAUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

28LN|1|B5|A|1959

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|U|1956
28LN|1|B5|A|1957
28LN|1|B5|U|1958
28LN|1|B5|A|1959
28LN|1|B5|G|1960
28LN|1|B5|A|1961
28LN|1|B5|C|1962
28LN|1|B5|A|1963
28LN|1|B5|G|1964
*
28LN|1|B5|C|2021
28LN|1|B5|C|2022
28LN|1|B5|G|2023
28LN|1|B5|A|2024
28LN|1|B5|A|2025

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BH

60S ribosomal protein L9

Chain BS

60S ribosomal protein L18a

Chain Bm

Ubiquitin-60S ribosomal protein L40

Chain Bs

60S acidic ribosomal protein P0