IL_28ZX_057

3D structure

PDB id

28ZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAGUA(PSU)G*(PSU)GAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZX|1|S2|G|1168
28ZX|1|S2|G|1169
28ZX|1|S2|A|1170
28ZX|1|S2|G|1171
28ZX|1|S2|U|1172
28ZX|1|S2|A|1173
28ZX|1|S2|PSU|1174
28ZX|1|S2|G|1175
*
28ZX|1|S2|PSU|1186
28ZX|1|S2|G|1187
28ZX|1|S2|A|1188
28ZX|1|S2|A|1189
28ZX|1|S2|A|1190
28ZX|1|S2|C|1191

Current chains

Chain S2

18S rRNA

Nearby chains

Chain Ln

60S ribosomal protein L41

Chain SX

40S ribosomal protein S23