IL_2AAR_011

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CAAG*CGAACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2AAR_011 not in the Motif Atlas

Homologous match to IL_7A0S_008

Geometric discrepancy: 0.4955

The information below is about IL_7A0S_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05192.8

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

2AAR|1|0|C|303
2AAR|1|0|A|304
2AAR|1|0|A|305
2AAR|1|0|G|306
*
2AAR|1|0|C|354
2AAR|1|0|G|355
2AAR|1|0|A|356
2AAR|1|0|A|357
2AAR|1|0|C|358
2AAR|1|0|G|359

Current chains

Chain 0

23S ribosomal RNA

Nearby chains