IL_2AAR_074

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UGGAG*CGAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2AAR_074 not in the Motif Atlas

Homologous match to IL_7A0S_070

Geometric discrepancy: 0.5327

The information below is about IL_7A0S_070

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.3

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

2AAR|1|0|U|1848
2AAR|1|0|G|1849
2AAR|1|0|G|1850
2AAR|1|0|A|1851
2AAR|1|0|G|1852
*
2AAR|1|0|C|1865
2AAR|1|0|G|1866
2AAR|1|0|A|1867
2AAR|1|0|A|1868
2AAR|1|0|A|1869

Current chains

Chain 0

23S ribosomal RNA

Nearby chains