IL_2AAR_090

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CAA*UGUAG

Length

8 nucleotides

Bulged bases

2AAR|1|0|U|2298

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2AAR_090 not in the Motif Atlas

Geometric match to IL_7RQB_082

Geometric discrepancy: 0.2449

The information below is about IL_7RQB_082

Detailed Annotation

Isolated tHS basepair with bulges

Broad Annotation

No text annotation

Motif group

IL_38958.7

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

15

Unit IDs

2AAR|1|0|C|2276
2AAR|1|0|A|2277
2AAR|1|0|A|2278
*
2AAR|1|0|U|2296
2AAR|1|0|G|2297
2AAR|1|0|U|2298
2AAR|1|0|A|2299
2AAR|1|0|G|2300

Current chains

Chain 0

23S ribosomal RNA

Nearby chains