IL_2AAR_097

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CCGAG*CGGCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2AAR_097 not in the Motif Atlas

Homologous match to IL_7RQB_095

Geometric discrepancy: 0.1438

The information below is about IL_7RQB_095

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

2AAR|1|0|C|2445
2AAR|1|0|C|2446
2AAR|1|0|G|2447
2AAR|1|0|A|2448
2AAR|1|0|G|2449
*
2AAR|1|0|C|2459
2AAR|1|0|G|2460
2AAR|1|0|G|2461
2AAR|1|0|C|2462
2AAR|1|0|G|2463

Current chains

Chain 0

23S ribosomal RNA

Nearby chains