IL_2FEY_027

3D structure

PDB id

2FEY (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of stem loop IV of Tetrahymena telomerase RNA

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

GAU*AUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GAU,AUC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2FEY_027 not in the Motif Atlas

Geometric match to IL_4LFB_063

Geometric discrepancy: 0.2227

The information below is about IL_4LFB_063

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

2FEY|7|A|G|17
2FEY|7|A|A|18
2FEY|7|A|U|19
*
2FEY|7|A|A|29
2FEY|7|A|U|30
2FEY|7|A|C|31

Current chains

Chain A

stem-loop IV of Tetrahymena telomerase RNA

Nearby chains