3D structure

PDB id
2J28 (explore in PDB, NAKB, or RNA 3D Hub)
Description
MODEL OF E. COLI SRP BOUND TO 70S RNCS
Experimental method
ELECTRON MICROSCOPY
Resolution
9.5 Å

Loop

Sequence
UAG*CAAAA
Length
8 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_2J28_019 not in the Motif Atlas
Homologous match to IL_4WF9_014
Geometric discrepancy: 0.1936
The information below is about IL_4WF9_014
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_76658.1
Basepair signature
cWW-L-R-cSH-cWW
Number of instances in this motif group
4

Unit IDs

2J28|1|B|U|293
2J28|1|B|A|294
2J28|1|B|G|295
*
2J28|1|B|C|343
2J28|1|B|A|344
2J28|1|B|A|345
2J28|1|B|A|346
2J28|1|B|A|347

Current chains

Chain B
23S RIBOSOMAL RNA

Nearby chains

No other chains within 10Å

Coloring options:


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