IL_2J28_028
3D structure
- PDB id
- 2J28 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MODEL OF E. COLI SRP BOUND TO 70S RNCS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2J28_028 not in the Motif Atlas
- Homologous match to IL_5J7L_263
- Geometric discrepancy: 0.0932
- The information below is about IL_5J7L_263
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
2J28|1|B|U|703
2J28|1|B|G|704
2J28|1|B|A|705
2J28|1|B|A|706
2J28|1|B|G|707
*
2J28|1|B|U|724
2J28|1|B|G|725
2J28|1|B|G|726
2J28|1|B|A|727
2J28|1|B|G|728
Current chains
- Chain B
- 23S RIBOSOMAL RNA
Nearby chains
- Chain C
- 50S RIBOSOMAL PROTEIN L2
Coloring options: