IL_2JL6_027
3D structure
- PDB id
- 2JL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- UGUAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2JL6_027 not in the Motif Atlas
- Geometric match to IL_7RQB_027
- Geometric discrepancy: 0.0801
- The information below is about IL_7RQB_027
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_38862.1
- Basepair signature
- cWW-L-R-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
2JL6|1|A|U|858
2JL6|1|A|G|859
2JL6|1|A|U|860
2JL6|1|A|A|861
2JL6|1|A|G|862
*
2JL6|1|A|C|915
2JL6|1|A|G|916
2JL6|1|A|A|917
2JL6|1|A|A|918
2JL6|1|A|G|919
Current chains
- Chain A
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L27
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain Q
- 50S RIBOSOMAL PROTEIN L16
Coloring options: