IL_2JL6_040
3D structure
- PDB id
- 2JL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 2JL6|1|A|U|1033
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2JL6_040 not in the Motif Atlas
- Geometric match to IL_4WF9_041
- Geometric discrepancy: 0.0998
- The information below is about IL_4WF9_041
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_76400.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
2JL6|1|A|G|1031
2JL6|1|A|A|1032
2JL6|1|A|U|1033
2JL6|1|A|G|1034
*
2JL6|1|A|C|1121
2JL6|1|A|G|1122
2JL6|1|A|C|1123
Current chains
- Chain A
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 9
- 50S RIBOSOMAL PROTEIN L36
- Chain H
- 50S RIBOSOMAL PROTEIN L6
- Chain Q
- 50S RIBOSOMAL PROTEIN L16
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