IL_2NZ4_011
3D structure
- PDB id
- 2NZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural investigation of the GlmS ribozyme bound to its catalytic cofactor
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- CAC*GUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CAC,GUG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2NZ4_011 not in the Motif Atlas
- Geometric match to IL_5Y85_006
- Geometric discrepancy: 0.1902
- The information below is about IL_5Y85_006
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
2NZ4|1|S|C|14
2NZ4|1|S|A|15
2NZ4|1|S|C|16
*
2NZ4|1|S|G|18
2NZ4|1|S|U|19
2NZ4|1|S|G|20
Current chains
- Chain S
- GlmS ribozyme
Nearby chains
- Chain D
- U1 Small Nuclear Ribonucleoprotein A
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