IL_2QBG_019

3D structure

PDB id

2QBG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UUAAC*GGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37976.1

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

44

Unit IDs

2QBG|1|B|U|606
2QBG|1|B|U|607
2QBG|1|B|A|608
2QBG|1|B|A|609
2QBG|1|B|C|610
*
2QBG|1|B|G|618
2QBG|1|B|G|619
2QBG|1|B|G|620
2QBG|1|B|A|621
2QBG|1|B|G|622

Current chains

Chain B

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15