3D structure

PDB id
2QBG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
CCCAGACAG*UCGAG
Length
14 nucleotides
Bulged bases
2QBG|1|B|A|1046
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_34363.4
Basepair signature
cWW-cSS-tSS-L-tSH-tSS-L-R-bif-cWW
Number of instances in this motif group
6

Unit IDs

2QBG|1|B|C|1043
2QBG|1|B|C|1044
2QBG|1|B|C|1045
2QBG|1|B|A|1046
2QBG|1|B|G|1047
2QBG|1|B|A|1048
2QBG|1|B|C|1049
2QBG|1|B|A|1050
2QBG|1|B|G|1051
*
2QBG|1|B|U|1108
2QBG|1|B|C|1109
2QBG|1|B|G|1110
2QBG|1|B|A|1111
2QBG|1|B|G|1112

Current chains

Chain B
23S rRNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain G
50S ribosomal protein L6

Coloring options:

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