IL_2QBG_077
3D structure
- PDB id
- 2QBG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 2QBG|1|B|A|1938, 2QBG|1|B|U|1944, 2QBG|1|B|U|1963
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15123.3
- Basepair signature
- cWW-L-R-cHW-L-L-L-L-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
2QBG|1|B|C|1934
2QBG|1|B|G|1935
2QBG|1|B|A|1936
2QBG|1|B|A|1937
2QBG|1|B|A|1938
2QBG|1|B|U|1939
2QBG|1|B|U|1940
2QBG|1|B|C|1941
2QBG|1|B|C|1942
2QBG|1|B|U|1943
2QBG|1|B|U|1944
2QBG|1|B|G|1945
*
2QBG|1|B|C|1961
2QBG|1|B|C|1962
2QBG|1|B|U|1963
2QBG|1|B|G|1964
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain 6
- ribosome recycling factor
- Chain C
- 50S ribosomal protein L2
Coloring options: