IL_2UXD_068
3D structure
- PDB id
- 2UXD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA CGGG in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CCGAAG*CGAGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2UXD_068 not in the Motif Atlas
- Homologous match to IL_5J7L_063
- Geometric discrepancy: 0.3133
- The information below is about IL_5J7L_063
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_80231.1
- Basepair signature
- cWW-L-R-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
2UXD|1|A|C|1430
2UXD|1|A|C|1431
2UXD|1|A|G|1432
2UXD|1|A|A|1433
2UXD|1|A|A|1434
2UXD|1|A|G|1435
*
2UXD|1|A|C|1466
2UXD|1|A|G|1467
2UXD|1|A|A|1468
2UXD|1|A|G|1469
2UXD|1|A|G|1470
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain T
- RIBOSOMAL PROTEIN S20
Coloring options: