IL_30QZ_027

3D structure

PDB id

30QZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

GGGGUAG*CGAAUAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30QZ|1|a|G|856
30QZ|1|a|G|857
30QZ|1|a|G|858
30QZ|1|a|G|859
30QZ|1|a|U|860
30QZ|1|a|A|861
30QZ|1|a|G|862
*
30QZ|1|a|C|915
30QZ|1|a|G|916
30QZ|1|a|A|917
30QZ|1|a|A|918
30QZ|1|a|U|919
30QZ|1|a|A|920
30QZ|1|a|C|921

Current chains

Chain a

23S rRNA

Nearby chains

Chain b

5S ribosomal RNA; 5S rRNA

Chain l

Large ribosomal subunit protein uL16

Chain v

Large ribosomal subunit protein bL27

Chain y

Large ribosomal subunit protein uL30