IL_8B0X_090

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

GGGGUAG*CGAAUAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_94128.1

Basepair signature

cWW-cWW-L-R-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

8B0X|1|a|G|858
8B0X|1|a|G|859
8B0X|1|a|G|860
8B0X|1|a|G|861
8B0X|1|a|U|862
8B0X|1|a|A|863
8B0X|1|a|G|864
*
8B0X|1|a|C|917
8B0X|1|a|G|918
8B0X|1|a|A|919
8B0X|1|a|A|920
8B0X|1|a|U|921
8B0X|1|a|A|922
8B0X|1|a|C|923

Current chains

Chain a

23S rRNA

Nearby chains

Chain b

5S ribosomal RNA; 5S rRNA

Chain l

50S ribosomal protein L16

Chain v

50S ribosomal protein L27

Chain y

50S ribosomal protein L30