IL_3BBX_030
3D structure
- PDB id
- 3BBX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 10 Å
Loop
- Sequence
- GGUAG*CGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3BBX_030 not in the Motif Atlas
- Geometric match to IL_4V9F_033
- Geometric discrepancy: 0.1397
- The information below is about IL_4V9F_033
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_38862.4
- Basepair signature
- cWW-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
3BBX|1|B|G|858
3BBX|1|B|G|859
3BBX|1|B|U|860
3BBX|1|B|A|861
3BBX|1|B|G|862
*
3BBX|1|B|C|915
3BBX|1|B|G|916
3BBX|1|B|A|917
3BBX|1|B|A|918
3BBX|1|B|U|919
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain A
- 5S ribosomal RNA; 5S rRNA
- Chain W
- 50S ribosomal protein L27
Coloring options: