IL_3CCR_089

3D structure

PDB id

3CCR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGAC*GGAAAAGAG

Length

14 nucleotides

Bulged bases

3CCR|1|0|G|2815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCR_089 not in the Motif Atlas

Homologous match to IL_4V9F_091

Geometric discrepancy: 0.0692

The information below is about IL_4V9F_091

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04638.4

Basepair signature

cWW-tSH-tHW-tHS-L-cWW-L-L

Number of instances in this motif group

6

Unit IDs

3CCR|1|0|C|2672
3CCR|1|0|U|2673
3CCR|1|0|G|2674
3CCR|1|0|A|2675
3CCR|1|0|C|2676
*
3CCR|1|0|G|2809
3CCR|1|0|G|2810
3CCR|1|0|A|2811
3CCR|1|0|A|2812
3CCR|1|0|A|2813
3CCR|1|0|A|2814
3CCR|1|0|G|2815
3CCR|1|0|A|2816
3CCR|1|0|G|2817

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain J

50S ribosomal protein L13P