IL_3CXC_107
3D structure
- PDB id
- 3CXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAAUCCUCUGAAG*CCAAAAUGAUCGGGA
- Length
- 28 nucleotides
- Bulged bases
- 3CXC|1|0|A|1123, 3CXC|1|0|A|1231, 3CXC|1|0|U|1234
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CXC_107 not in the Motif Atlas
- Homologous match to IL_4V9F_109
- Geometric discrepancy: 0.0305
- The information below is about IL_4V9F_109
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_39721.1
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
3CXC|1|0|U|1122
3CXC|1|0|A|1123
3CXC|1|0|A|1124
3CXC|1|0|U|1125
3CXC|1|0|C|1126
3CXC|1|0|C|1127
3CXC|1|0|U|1128
3CXC|1|0|C|1129
3CXC|1|0|U|1130
3CXC|1|0|G|1131
3CXC|1|0|A|1132
3CXC|1|0|A|1133
3CXC|1|0|G|1134
*
3CXC|1|0|C|1228
3CXC|1|0|C|1229
3CXC|1|0|A|1230
3CXC|1|0|A|1231
3CXC|1|0|A|1232
3CXC|1|0|A|1233
3CXC|1|0|U|1234
3CXC|1|0|G|1235
3CXC|1|0|A|1236
3CXC|1|0|U|1237
3CXC|1|0|C|1238
3CXC|1|0|G|1239
3CXC|1|0|G|1240
3CXC|1|0|G|1241
3CXC|1|0|A|1242
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 9
- 5S ribosomal RNA; 5S rRNA
- Chain B
- RIBOSOMAL PROTEIN L3
- Chain H
- RIBOSOMAL PROTEIN L10E
- Chain I
- RIBOSOMAL PROTEIN L13
- Chain V
- RIBOSOMAL PROTEIN L30
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