IL_3EOG_003
3D structure
- PDB id
- 3EOG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystallization showing exon recognition by a group II intron
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.39 Å
Loop
- Sequence
- CAAG*UGAAGGAAG
- Length
- 13 nucleotides
- Bulged bases
- 3EOG|1|A|A|105, 3EOG|1|A|A|106, 3EOG|1|A|G|107
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3EOG_003 not in the Motif Atlas
- Geometric match to IL_3IGI_003
- Geometric discrepancy: 0.1214
- The information below is about IL_3IGI_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89312.1
- Basepair signature
- cWW-tSH-L-cWS-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
3EOG|1|A|C|76
3EOG|1|A|A|77
3EOG|1|A|A|78
3EOG|1|A|G|79
*
3EOG|1|A|U|103
3EOG|1|A|G|104
3EOG|1|A|A|105
3EOG|1|A|A|106
3EOG|1|A|G|107
3EOG|1|A|G|108
3EOG|1|A|A|109
3EOG|1|A|A|110
3EOG|1|A|G|111
Current chains
- Chain A
- Group IIC intron
Nearby chains
- Chain B
- 5'-R(*UP*UP*AP*UP*UP*A)-3'
Coloring options: