IL_3F2T_001

3D structure

PDB id

3F2T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the FMN riboswitch bound to FMN, iridium hexamine soak.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAU*AUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3F2T_001 not in the Motif Atlas

Geometric match to IL_5E81_371

Geometric discrepancy: 0.1263

The information below is about IL_5E81_371

Detailed Annotation

Self complementary

Broad Annotation

Self complementary

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

3F2T|1|X|G|2
3F2T|1|X|A|3
3F2T|1|X|U|4
*
3F2T|1|X|A|109
3F2T|1|X|U|110
3F2T|1|X|U|111

Current chains

Chain X

FMN riboswitch

Nearby chains