IL_3F2X_001

3D structure

PDB id

3F2X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the FMN riboswitch bound to FMN, Cs+ soak.

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

UUC*GAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UUC,GAA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3F2X_001 not in the Motif Atlas

Geometric match to IL_4LFB_061

Geometric discrepancy: 0.1705

The information below is about IL_4LFB_061

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

3F2X|1|X|U|6
3F2X|1|X|U|7
3F2X|1|X|C|8
*
3F2X|1|X|G|105
3F2X|1|X|A|106
3F2X|1|X|A|107

Current chains

Chain X

FMN riboswitch

Nearby chains