IL_3J28_070
3D structure
- PDB id
- 3J28 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.9 Å
Loop
- Sequence
- UGG*CCA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: UGG,CCA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J28_070 not in the Motif Atlas
- Geometric match to IL_1ZZ5_002
- Geometric discrepancy: 0.2503
- The information below is about IL_1ZZ5_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
3J28|1|N|U|1354
3J28|1|N|G|1355
3J28|1|N|G|1356
*
3J28|1|N|C|1366
3J28|1|N|C|1367
3J28|1|N|A|1368
Current chains
- Chain N
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: