IL_3J2A_033

3D structure

PDB id

3J2A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

13.1 Å

Loop

Sequence

AGU*ACU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: AGU,ACU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J2A_033 not in the Motif Atlas

Geometric match to IL_3LA5_001

Geometric discrepancy: 0.1576

The information below is about IL_3LA5_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

3J2A|1|N|A|655
3J2A|1|N|G|656
3J2A|1|N|U|657
*
3J2A|1|N|A|749
3J2A|1|N|C|750
3J2A|1|N|U|751

Current chains

Chain N

16S rRNA

Nearby chains