IL_3J2A_055

3D structure

PDB id

3J2A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

13.1 Å

Loop

Sequence

GUUGC*GAACUC

Length

11 nucleotides

Bulged bases

3J2A|1|N|U|1126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J2A_055 not in the Motif Atlas

Geometric match to IL_5J7L_051

Geometric discrepancy: 0.2166

The information below is about IL_5J7L_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06691.1

Basepair signature

cWW-cWS-L-R-L-R-cWW-L

Number of instances in this motif group

2

Unit IDs

3J2A|1|N|G|1124
3J2A|1|N|U|1125
3J2A|1|N|U|1126
3J2A|1|N|G|1127
3J2A|1|N|C|1128
*
3J2A|1|N|G|1144
3J2A|1|N|A|1145
3J2A|1|N|A|1146
3J2A|1|N|C|1147
3J2A|1|N|U|1148
3J2A|1|N|C|1149

Current chains

Chain N

16S rRNA

Nearby chains