IL_3J2B_047

3D structure

PDB id

3J2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

CGGGG*CUUG

Length

9 nucleotides

Bulged bases

3J2B|1|N|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J2B_047 not in the Motif Atlas

Geometric match to IL_6AZ4_001

Geometric discrepancy: 0.3719

The information below is about IL_6AZ4_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69145.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

5

Unit IDs

3J2B|1|N|C|924
3J2B|1|N|G|925
3J2B|1|N|G|926
3J2B|1|N|G|927
3J2B|1|N|G|928
*
3J2B|1|N|C|1389
3J2B|1|N|U|1390
3J2B|1|N|U|1391
3J2B|1|N|G|1392

Current chains

Chain N

16S rRNA

Nearby chains