IL_3J2B_080
3D structure
- PDB id
- 3J2B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- UAGC*GCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J2B_080 not in the Motif Atlas
- Geometric match to IL_7RQB_031
- Geometric discrepancy: 0.3486
- The information below is about IL_7RQB_031
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_46796.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
3J2B|1|N|U|1440
3J2B|1|N|A|1441
3J2B|1|N|G|1442
3J2B|1|N|C|1443
*
3J2B|1|N|G|1459
3J2B|1|N|C|1460
3J2B|1|N|G|1461
Current chains
- Chain N
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: