IL_3J2F_073

3D structure

PDB id

3J2F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

17.6 Å

Loop

Sequence

AAA*UUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: AAA,UUU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J2F_073 not in the Motif Atlas

Geometric match to IL_4KQ0_001

Geometric discrepancy: 0.2554

The information below is about IL_4KQ0_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.6

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

3J2F|1|N|A|1428
3J2F|1|N|A|1429
3J2F|1|N|A|1430
*
3J2F|1|N|U|1470
3J2F|1|N|U|1471
3J2F|1|N|U|1472

Current chains

Chain N

16S rRNA

Nearby chains