IL_3J2H_003

3D structure

PDB id

3J2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

18.8 Å

Loop

Sequence

CCUAAC*GGG

Length

9 nucleotides

Bulged bases

3J2H|1|N|C|48, 3J2H|1|N|A|51

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J2H_003 not in the Motif Atlas

Homologous match to IL_4LFB_003

Geometric discrepancy: 0.5305

The information below is about IL_4LFB_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14177.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

3J2H|1|N|C|47
3J2H|1|N|C|48
3J2H|1|N|U|49
3J2H|1|N|A|50
3J2H|1|N|A|51
3J2H|1|N|C|52
*
3J2H|1|N|G|359
3J2H|1|N|G|360
3J2H|1|N|G|361

Current chains

Chain N

16S rRNA

Nearby chains