IL_3J2H_043

3D structure

PDB id

3J2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

18.8 Å

Loop

Sequence

AGG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J2H_043 not in the Motif Atlas

Geometric match to IL_4ZC7_004

Geometric discrepancy: 0.3119

The information below is about IL_4ZC7_004

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

3J2H|1|N|A|831
3J2H|1|N|G|832
3J2H|1|N|G|833
*
3J2H|1|N|C|853
3J2H|1|N|U|854
3J2H|1|N|U|855

Current chains

Chain N

16S rRNA

Nearby chains