IL_3J2H_054

3D structure

PDB id

3J2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

18.8 Å

Loop

Sequence

GG*UCAUC

Length

7 nucleotides

Bulged bases

3J2H|1|N|C|1200, 3J2H|1|N|A|1201

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J2H_054 not in the Motif Atlas

Homologous match to IL_5J7L_048

Geometric discrepancy: 0.1769

The information below is about IL_5J7L_048

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_95583.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

11

Unit IDs

3J2H|1|N|G|1057
3J2H|1|N|G|1058
*
3J2H|1|N|U|1199
3J2H|1|N|C|1200
3J2H|1|N|A|1201
3J2H|1|N|U|1202
3J2H|1|N|C|1203

Current chains

Chain N

16S rRNA

Nearby chains