IL_3J6B_030
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AUAAA*UGAAU
- Length
- 10 nucleotides
- Bulged bases
- 3J6B|1|A|A|1176
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J6B_030 not in the Motif Atlas
- Geometric match to IL_4WF9_036
- Geometric discrepancy: 0.1785
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
3J6B|1|A|A|924
3J6B|1|A|U|925
3J6B|1|A|A|926
3J6B|1|A|A|927
3J6B|1|A|A|928
*
3J6B|1|A|U|1173
3J6B|1|A|G|1174
3J6B|1|A|A|1175
3J6B|1|A|A|1176
3J6B|1|A|U|1177
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 4
- 54S ribosomal protein L51, mitochondrial
- Chain N
- 54S ribosomal protein L49, mitochondrial
- Chain U
- 54S ribosomal protein L33, mitochondrial
- Chain a
- 54S ribosomal protein L20, mitochondrial
- Chain c
- 54S ribosomal protein L31, mitochondrial
Coloring options: