IL_3J71_145
3D structure
- PDB id
- 3J71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UGUAUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 3J71|1|5|U|4634, 3J71|1|5|U|4636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J71_145 not in the Motif Atlas
- Geometric match to IL_8P9A_346
- Geometric discrepancy: 0.3442
- The information below is about IL_8P9A_346
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_98200.2
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
3J71|1|5|U|4632
3J71|1|5|G|4633
3J71|1|5|U|4634
3J71|1|5|A|4635
3J71|1|5|U|4636
3J71|1|5|G|4637
*
3J71|1|5|C|4662
3J71|1|5|G|4663
3J71|1|5|A|4664
3J71|1|5|A|4665
3J71|1|5|G|4666
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein uL3
- Chain W
- Ribosomal protein eL24
- Chain d
- Ribosomal protein eL31
Coloring options: