IL_3J74_058
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGCCG*CGCG
- Length
- 9 nucleotides
- Bulged bases
- 3J74|1|5|C|2084
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J74_058 not in the Motif Atlas
- Geometric match to IL_1MFQ_004
- Geometric discrepancy: 0.283
- The information below is about IL_1MFQ_004
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.3
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
3J74|1|5|C|2081
3J74|1|5|G|2082
3J74|1|5|C|2083
3J74|1|5|C|2084
3J74|1|5|G|2085
*
3J74|1|5|C|2272
3J74|1|5|G|2273
3J74|1|5|C|2274
3J74|1|5|G|2275
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- Ribosomal protein uL4
- Chain F
- Ribosomal protein uL30
- Chain Q
- Ribosomal protein eL18
- Chain e
- Ribosomal protein eL32
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