IL_3J74_108
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGUCC*GUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J74_108 not in the Motif Atlas
- Geometric match to IL_7A0S_040
- Geometric discrepancy: 0.3939
- The information below is about IL_7A0S_040
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.3
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 41
Unit IDs
3J74|1|5|G|4768
3J74|1|5|G|4769
3J74|1|5|U|4770
3J74|1|5|C|4771
3J74|1|5|C|4772
*
3J74|1|5|G|4863
3J74|1|5|U|4864
3J74|1|5|C|4865
3J74|1|5|C|4866
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain H
- Ribosomal protein uL6
- Chain O
- Ribosomal protein uL13
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