IL_3J74_127
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 3J74|1|S2|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J74_127 not in the Motif Atlas
- Geometric match to IL_8CRE_400
- Geometric discrepancy: 0.2271
- The information below is about IL_8CRE_400
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24485.2
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 5
Unit IDs
3J74|1|S2|G|145
3J74|1|S2|G|146
3J74|1|S2|A|147
3J74|1|S2|U|148
3J74|1|S2|A|149
3J74|1|S2|A|150
3J74|1|S2|C|151
*
3J74|1|S2|G|167
3J74|1|S2|C|168
3J74|1|S2|U|169
3J74|1|S2|A|170
3J74|1|S2|A|171
3J74|1|S2|U|172
3J74|1|S2|A|173
3J74|1|S2|C|174
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SG
- Ribosomal protein eS6
- Chain SY
- Ribosomal protein eS24
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